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| public:lofar_processing_juelich [2015-08-10 13:01] – Stefan Froehlich | public:lofar_processing_juelich [2017-03-08 15:27] (current) – external edit 127.0.0.1 | ||
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| ==== SRM Copy ==== | ==== SRM Copy ==== | ||
| - | For data acquisition with grid-tools please use the Judac system. Your account for Jureca will also work for Judac. | + | For data acquisition with grid-tools please use the Judac system. Your account for Jureca will also work for Judac.\\ |
| [[http:// | [[http:// | ||
| Line 38: | Line 38: | ||
| To use the grid-proxies simple follow these steps:\\ | To use the grid-proxies simple follow these steps:\\ | ||
| Store your private key in '' | Store your private key in '' | ||
| - | Execute:\\ < | + | Store your signed certificate in '' |
| + | Execute:\\ | ||
| + | < | ||
| + | chmod 400 $HOME/ | ||
| + | chmod 600 $HOME/ | ||
| + | </ | ||
| Store your signed certificate in '' | Store your signed certificate in '' | ||
| Then you have to generate a proxy. | Then you have to generate a proxy. | ||
| Line 49: | Line 54: | ||
| ==== LOFAR Software ==== | ==== LOFAR Software ==== | ||
| The LOFAR Software Framework is installed in the home directory of user htb003. You load the environment with | The LOFAR Software Framework is installed in the home directory of user htb003. You load the environment with | ||
| - | < | + | < |
| - | This loads Release version 2.1 (in the future probably always the latest release). You can also load a 2.3 version (env_lofar_2.3.sh).\\ | + | This loads Release version 2.11.\\ |
| There is more software available: | There is more software available: | ||
| Line 57: | Line 62: | ||
| * losoto -> env_losoto.sh | * losoto -> env_losoto.sh | ||
| + | Losoto is also part of the python installation.\\ | ||
| In addition you might need a copy of the measurement data\\ | In addition you might need a copy of the measurement data\\ | ||
| - | /lustre/ | + | /homea/ |
| Put it in your home directory and point to it in a file .casarc (just contains:" | Put it in your home directory and point to it in a file .casarc (just contains:" | ||
| [yourhome]/ | [yourhome]/ | ||
| If you require access to the GlobalSkyModel database, there is a copy of | If you require access to the GlobalSkyModel database, there is a copy of | ||
| - | the database from the CEP Cluster | + | the database from the CEP Cluster running on the Jureca |
| - | login node juropa02. Access the databse " | + | login node jrl09. Access the databse " |
| " | " | ||
| \\ | \\ | ||
| + | To run your jobs on the compute nodes you first have to setup and submit | ||
| + | a job via the batch system. A detailed description can be found on the | ||
| + | Jureca homepage \\ | ||
| + | [[http:// | ||
| + | |||
| + | When configuring the resources on the system please use only the ' | ||
| + | To run a generic pipeline on multiple nodes configure the pipeline as follows: | ||
| + | In your ' | ||
| + | < | ||
| + | [remote] | ||
| + | method = slurm_srun | ||
| + | max_per_node = 1 | ||
| + | </ | ||
| + | Set ' | ||