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["Pulsar Pipeline Checklist"]
[null,"tasks","Developer","Commissioner","Expected date of readiness","remarks"]
["BG/P","TAB Pipeline","John Romain, Jan David Mol, Rob van Nieuwpoort ","Jan David Mol, Jason Hessels ","Done in early 2009"]
[null,"Design/preparatory work for BG/P 2nd transpose","John Romain, Jan David Mol, Rob van Nieuwpoort ",null,"Done","John, Jan David and Rob have completed the discussions;  4-phased for transpose prep, then transpose"]
[null,"Implement BG/P 2nd data transpose","Jan David Mol","John Romain, Jan David Mol","several weeks (mid-Apr)","Rob will no longer be involved;  Jan David will implement the entirety of the 2nd transpose"]
[null,"Document \"new\" BFout stream (post 2nd transpose)","Jan David Mol","Jan David Mol, Alwin","1-2 days","Jan David is away until next Friday;  Alwin to work with John Romain on BF TAB stream contents"]
[null,"Test and bug fix 2nd transpose","Rob van Nieuwpoort, Jan David Mol, John Romain","Jan David Mol, Alwin de Jong, Jason Hessels","1-2 weeks"]
[null,"Integrate phase correction into TAB module","Jan David Mol, John","JD, Jason"]
[null,"Implement Phase-Frequency correction due to cable lengths","John Romain, Michiel B.","Michiel B., Jason Hessels"]
[null,"Implement LOFAR center as LBA center position of station CS002","Chris B.","Chris B."]
[]
["SAS / MAC/MoM","Integrate of TAB module into SAS/MAC","Jan David Mol, Ruud Overeem","Jan David Mol, Ruud Overeem",null,"Need to ask Jan David for a status on this issue;  rumor has it that this is working"]
[null,"Offline Pipeline connection to SAS/MAC","John Swinbank, Ken Anderson, A2, Ruud Overeem","John Swinbank, Ken Anderson, A2, Ruud Overeem",null,"John is working with Ruud on the messaging/communication aspect"]
[null,"MoM connection to SAS/MAC","Jason, Hanno, Antonis"]
[]
["BF2H5 online version","BeamFormed Writer (1st version to OLD ICD spec)","Alwin de Jong","Alwin de Jong, J. Hessels","Done","Working again;  can read parset file and feed keys to header;  works w/o UDP"]
[null,"Test svn externals when building LOFARSOFT with the DAL","Lars Baehren, Marcel Loose, Alwin de Jong","Alwin de Jong, Marcel","in process, 1-week","Lars has spoken to Marcel and emailed relevant info;  Lars to touch base with Marcel to implement into LOFARSOFT"]
[null,"Integrate DAL classes into BF2H5","Alwin de Jong","Alwin de Jong"]
[null,"Integrate parset reader into BF writer w/in LOFARSOFT","Alwin de Jong, Jan David Mol","Alwin de Jong"]
[null,"Integrate new BF H5 data format (ICD) into BF2H5 (raw data)","Alwin de Jong","Alwin de Jong, A2, J. Hessels"]
[null,"Integrate new BF H5 data format (ICD) into BF2H5 (BG/P out data)","Alwin de Jong, Jan David Mol","Alwin de Jong, A2, J. Hessels, Jan David Mol"]
[null,"Test writing 248 subands at once to check efficiency","Alwin de Jong","Alwin de Jong, Jason"]
[]
["BF ICD","Create mock BF H5 files with 4 types of data storage containers","A2","A2","Done","4 types are: 1D arrays, ND arrays, 1D tables, ND tables (note ND arrays are memory limited)"]
[null,"Benchmark (DAL C++) 4 storage types to choose optimum BF container","A2, L. Baehren","A2, Jason Hessels","1-2 weeks","DAL is missing Array/Table real() methods from sub-groups;  Lars to add functionality before benchmarking can start"]
[null,"Finalize BF ICD","A2, L. Baehren, J. Romain, JD Mol, J. Hessels, K. Anderson","A2, Lars Baehren, J. Romain, JD Mol, J. Hessels, M. Wise",null,"John Romain's comments and James Anderson's comments integrated;  moved Coord Group; may changes"]
[null,"Identify source of metadata values (& calculations)","Hanno, R. Overeem, J. Hessels, M. Wise, Alwin de Jong, A2, B. Stappers",null,null,"Put this as an adgenda item for discussion during the next BF status meeting"]
[null,"Profile BF Observations (& Pipeline) for typical stats on sizes","J. Hessels, B. Stappers, M. Wise",null,null,"should be a chart in the ICD to view typical data sizes for types of observations; waiting on Jason"]
[]
["DAL","Create DAL classes for BF metadata and structure (abide by ICD)","Lars Baehren, A2",null,"in process","implemented three highest tiers of H5 structure (not yet lowest tier where the data structures are)"]
[null,"Create DAL methods to access data from BF structure (abide by ICD)","Lars Baehren, A2"]
[null,"Wrap BF DAL classes and methods with Python for PyDAL","A2, Lars Baehren, K. Anderson","The Pulsar Group"]
[null,"Ongoing PyDAL updates and bugfixes","A2, Lars Baehren, Frank B.",null,"in process","need to formalize the to-do and bug list"]
[null,"Integrate HDF5 into file I/O for Presto/TEMPO/etc","A2","The Pulsar Group"]
[]
["Pulsar Tools","Daily build of USG repository on offline cluster","Arno, Mike Wise, Lars",null,null,"Mike to start up the process of asking Arno to include this in a daily build"]
[null,"Integrate FFTW-3.1.2 into cmake","A2",null,"Done"]
[null,"Integrate PPGPLOT into cmake","A2",null,"Done","note, depends on system install of PGPLOT"]
[null,"Interate TEMPO into cmake","A2",null,"Done","workaround for problems with reading files with line length > 70 chars;  fix requested to developer"]
[null,"Integrate PRESTO into cmake","A2; Lars","A2 fixing seg fault & other issues on new cluster build","1-2 weeks","accelsearch sef fault (non LOFAR data);  cmake external dependencies can be made smarter (Lars)"]
[null,"Integrate SIGPROC into cmake","A2","Ben Stappers, Joeri"]
[null,"Integrate PSRCHIV into cmake","A2","Ben Stappers",null,"Does not build on the Mac (needs specific version of X11)"]
[null,"Integrate SSPS (Single Pulse sw and docs) into cmake","A2, Thijs Coenen","A2, Thijs Coenen, Joeri",null,"Does not build on the Mac (needs specific version of X11)"]
[null,"Test software installation/components on new cluster","A2, J. Hessels, B. Stappers","The Pulsar Group","in process","fixing problems as they unfold"]
[null,"Test software installation/components on user machines","Pulsar Group",null,"in process; low priority","Ramesh would like a copy of the software suite within cmake; TEMPO doesn't build on Mac OS 10.6"]
[null,"Integate \"convert\" (bf2presto) into cmake","A2","A2, Tom Hassall"]
[null,"Update/maintain/expand \"convert\" (bf2presto) program for BF observations","Tom Hassall, A2, Jan David Mol","A2, Tom Hassall, Jan David Mol, J. Hessels",null,"Tom needs to check in his version into the ISG repository"]
[null,"Assist Pulsar Group with integration of tools/scripts into cmake & USG","A2; Lars"]
[null,"Maintain/upgrade Pulsar shell script pipeline","A2, Pulsar Group","A2, Tom Hassall",null,"A2 updated to use 8-cores per mode;  speed increase 5-6 times"]
[]
["Pulsar Pipeline Integration","Design Pulsar Pipeline for basic observing modes","J. Hessels, B. Stappers, J. van Leeuwen, A2, M. Wise","The Pulsar Group",null,"create use-cases and map these to tools/parameter settings; start at PBW #6"]
[null,"Decide how to distribute the Pulsar Pipeline","M. Wise, L. Baehren, J. Hessels, A2, J. Swinbank",null,null,"do we need to integrate the Transient S/W repository with the USG S/W repository?"]
[null,"Implement Pulsar Pipeline Design within the iPython Framework","A2, K. Anderson, J. Swinbank","A2, K. Anderson, J. Swinbank",null,"current SH scripts pipeline described and sent to Ken;  John & Ken to meet about iPhython Framework"]
[null,"Pipeline Testing","A2, K. Anderson, J. Swinbank, J. Hessels, B. Stappers, J. Van Leeuwen","A2, J. Hessels, B. Stappers, J. Van Leeuwen"]
[null,"Release Pulsar Pipeline","M. Wise"]
[null,"Design Pulsar Pipeline(s) for other observing modes including survey","J. Hessels, B. Stappers, J. van Leeuwen, A2, M. Wise",null,null,"not needed for completion of first pipelline release"]
[null,"Design Pulsar Pipeline for \"Quicklook\" results in realtime (LOFAR opening)","J. Hessels, B. Stappers, J. van Leeuwen, A2, M. Wise","A2, K. Anderson, J. Swinbank"]
[null,"Test Known Pulsar Quicklook Pipeline","J. Hessels, B. Stappers, A2, K. Anderson"]
[]
["BF2H5 offline version","Extraction process of parameterDB out of LOFARSOFT & distribute offline","Mike to assign this issue to different group"]
[null,"Create standalone BF2H5 tool","Alwin de Jong","Masaya, James Anderson"]
[null,"UDP reader/interpreter library (UK)","Alessio, Aris, Chris","Alessio, Aris, Chris, Alwin","1st version Apr 7th","on target to meet one month deadline from start-up of project"]
[]
["Archive","Sync Archive schema with BF ICD","A. Renting, A2, L. Baehren, M. Wise, R. Overeem","A. Renting, A2, J. Hessels","in process","meetings took place to mesh the LOFAR ICD with the Archive schema"]
[null,"Archive Pulsar raw data","A. Renting","A. Renting, A2, J. Hessels, M. Wise"]
[null,"Archive Pulsar Pipeline Processed data","A. Renting, A2","A. Renting, A2, J. Hessels, M. Wise"]
[]
["Misc.","Remove PGPLOT from PRESTO","Lars Baehren, A2","The Pulsar Group",null,"investigate S2PLOT or some other package which can be used in general for LOFAR data plotting"]
[null,"Work with the VO on format/protocol issues for LOFAR HDF5 data","J. Swinbank, A2, M. Wise, K. Anderson","?",null,"not needed for pipeline release"]
[null,"Perform benchmarking on H5 chunking","K. Anderson, A2, L. Baehren",null,null,"not necessary for completion of the pipeline"]

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