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["Pulsar Pipeline Checklist"]
[null,"tasks","Developer","Commissioner","Expected date of readiness","remarks"]
["BG/P"]
[null,"Design/preparatory work for BG/P 2nd transpose","John Romain, Jan David Mol, Rob van Nieuwpoort ",null,"in process, 1-2 months","Rob and John have started talking about what needs to be done"]
[null,"Implement BG/P 2nd data transpose","Rob van Nieuwpoort ","Rob van Nieuwpoort, John Romain, Jan David Mol","1-2 months","Rob works at ASTRON 1-day/week;  additional days in Delft for LOFAR"]
[null,"Document \"new\" BFout stream (post 2nd transpose)","Jan David Mol","Jan David Mol, Alwin","1-2 days"]
[null,"Test and bug fix 2nd transpose","Rob van Nieuwpoort, Jan David Mol, John Romain","Rob van Nieuwpoort, Jan David Mol, Alwin de Jong, Jason Hessels","1-2 weeks"]
[]
["SAS / MAC"]
[null,"Integrate of TAB module into SAS/MAC","Jan David Mol, Ruud Overeem","Jan David Mol, Ruud Overeem"]
[]
["BF2H5"]
["online version","Merge USG repository as svn external package into LOFARSOFT","Lars Baehren, Marcel Loose","Alwin de Jong, Marcel","in process, 1-week","Lars has spoken to Marcel and emailed relevant info;  Lars to touch base with Marcel to implement into LOFARSOFT"]
[null,"Integrate DAL \"BF\" and \"Common\" classes into BF2H5","Alwin de Jong","Alwin de Jong"]
[null,"Integrate parset reader into BF writer w/in LOFARSOFT","Alwin de Jong, Jan David Mol","Alwin de Jong"]
[null,"Integrate new BF H5 data format (ICD) into BF2H5 (raw data)","Alwin de Jong","Alwin de Jong, A2, J. Hessels"]
[null,"Integrate new BF H5 data format (ICD) into BF2H5 (BG/P out data)","Alwin de Jong, Jan David Mol","Alwin de Jong, A2, J. Hessels, Jan David Mol"]
[]
["offline version","Extract UDPcopy and IonProc out of LOFARSOFT","Alwin de Jong, Jan David Mol, Masaya","Alwin de Jong"]
[null,"Extract parameterDB out of LOFARSOFT","Alwin de Jong, Jan David Mol, Masaya","Alwin de Jong"]
[null,"Create standalone BF2H5 tool","Alwin de Jong, Masaya","Masaya, James Anderson"]
[]
["BF ICD"]
[null,"Create mock BF H5 files with 4 types of data storage containers","A2","A2","Done","4 types are: 1D arrays, ND arrays, 1D tables, ND tables (note ND arrays are memory limited)"]
[null,"Benchmark (DAL C++) 4 storage types to choose optimum BF container","A2","A2, Jason Hessels","1-2 weeks"]
[null,"Finalize BF ICD","A2, L. Baehren, J. Romain, JD Mol, J. Hessels, K. Anderson","A2, Lars Baehren, J. Romain, JD Mol, J. Hessels, M. Wise"]
[null,"(Perform benchmarking on H5 chunking)","K. Anderson, A2, L. Baehren",null,null,"not necessary for completion of the pipeline"]
[null,"Identify source of metadata values (& calculations)","Alwin de Jong, R. Overeem, J. Hessels, M. Wise, A2, B. Stappers",null,null,"need to schedule a meeting to go over these issues (possibly during PBW #6)"]
[null,"Profile BF Observations (& Pipeline) for typical stats on sizes","J. Hessels, B. Stappers, M. Wise",null,null,"should be a chart in the ICD to view typical data sizes for types of observations"]
[]
["USG Software Repository"]
["Integrate Pulsar SW into USG","Integrate FFTW-3.1.2 into cmake","A2",null,"Done"]
[null,"Integrate PPGPLOT into cmake","A2",null,"Done","note, depends on system install of PGPLOT"]
[null,"Interate TEMPO into cmake","A2",null,"Done","workaround for problems with reading files with line length > 70 chars;  fix requested to developer"]
[null,"Integrate PRESTO into cmake","A2","A2 fixing seg fault & other issues on new cluster build","1-2 weeks"]
[null,"Integrate SIGPROC into cmake","A2",null,null,"not 100% sure this is needed"]
[null,"Test software installation/components on new cluster","A2, J. Hessels, B. Stappers","The Pulsar Group","in process"]
[null,"Test software installation/components on user machines","Pulsar Group",null,null,"Ramesh would like a copy of the software suite within cmake"]
[]
["DAL","Create DAL classes for BF metadata and structure (abide by ICD)","Lars Baehren, A2",null,"in process","implemented three highest tiers of H5 structure (not yet lowest tier where the data structures are)"]
[null,"Create DAL methods to access data from BF structure (abide by ICD)","Lars Baehren, A2"]
[null,"Wrap BF DAL classes and methods with Python for PyDAL","A2, Lars Baehren, K. Anderson","The Pulsar Group"]
[null,"Ongoing PyDAL updates and bugfixes","A2, Lars Baehren, Frank B.",null,"in process","need to formalize the to-do and bug list"]
[null,"Integrate HDF5 into file I/O for Presto/TEMPO/etc","A2","The Pulsar Group"]
[]
["Related Tools","Update/maintain/expand \"convert\" program for ongoing BF observations","Tom Hassal, A2, Jan David Mol","A2, Tom Hassal, Jan David Mol, J. Hessels",null,"needs documentation and upgrade to accept command line parameters"]
[null,"Integate \"convert\" into cmake","A2","A2, Tom Hassal"]
[]
["Pulsar Pipeline"]
[null,"Design Pulsar Pipeline for basic onserving modes","J. Hessels, B. Stappers, J. van Leeuwen, A2, M. Wise","The Pulsar Group",null,"create use-cases and map these to tools/parameter settings; start at PBW #6"]
[null,"Decide how to distribute the Pulsar Pipeline","M. Wise, L. Baehren, J. Hessels, A2, J. Swinbank",null,null,"do we need to integrate the Transient S/W repository with the USG S/W repository?"]
[null,"Implement Pulsar Pipeline Design within the iPython Framework","A2, K. Anderson, J. Swinbank","A2, K. Anderson, J. Swinbank"]
[null,"Pipeline Testing","A2, K. Anderson, J. Swinbank, J. Hessels, B. Stappers, J. Van Leeuwen","A2, J. Hessels, B. Stappers, J. Van Leeuwen"]
[null,"Release Pulsar Pipeline","M. Wise"]
[null,"Design Pulsar Pipeline(s) for other observing modes including survey","J. Hessels, B. Stappers, J. van Leeuwen, A2, M. Wise",null,null,"not needed for completion of first pipelline release"]
[]
["Archive"]
[null,"Sync Archive schema with BF ICD","A. Renting, A2, L. Baehren, M. Wise, R. Overeem","A. Renting, A2, J. Hessels","in process","meetings took place to mesh the LOFAR ICD with the Archive schema"]
[null,"Archive Pulsar raw data","A. Renting","A. Renting, A2, J. Hessels, M. Wise"]
[null,"Archive Pulsar Pipeline Processed data","A. Renting, A2","A. Renting, A2, J. Hessels, M. Wise"]
[]
["Misc."]
[null,"(Remove PGPLOT from PRESTO)","Lars Baehren, A2","The Pulsar Group",null,"investigate S2PLOT or some other package which can be used in general for LOFAR data plotting"]
[null,"(Work with the VO on format/protocol issues for LOFAR HDF5 data)","J. Swinbank, A2, M. Wise, K. Anderson","?",null,"not needed for pipeline release"]
[]
[]
["Notes: Nov 18, 2009","Alwin is working on scheduler for SAS/MAC and publishing"]
[null,"Offline and online BF2H5 versions need to exist in the future"]
[null,"Add EXPOSURE TIME specification in nanoseconds to ICD"]
[null,"Schedule meeting to discuss storage node write access to BF data"]
[null,"A2 to add this document to the wiki"]

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