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public:user_software:documentation:standard_imaging_pipeline [2016-12-15 07:57] – Document moved from software:standard_imaging_pipeline Arno Schoenmakerspublic:user_software:documentation:standard_imaging_pipeline [2017-03-08 15:27] (current) – external edit 127.0.0.1
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-===== Documentation for the Standard Imaging Pipeline ===== +===== Some useful links for the Standard Imaging Pipeline =====
- +
-=== News === +
-| 23-Apr-2015 | DPPP has option of user defined steps (possibly in Python) | +
-| 22-Apr-2014 | Version 14.1 of the [[http://www.astron.nl/radio-observatory/lofar/lofar-imaging-cookbook/|Imaging Cookbook]] is released | +
-| 25-Sep-2012 | Version 1.0 of the online pipeline documentation: [[https://proxy.lofar.eu/pipeline_docs|pipeline-docs]] | +
-| 06-Apr-2012 | Version 11.0 of the [[http://www.astron.nl/radio-observatory/lofar/lofar-imaging-cookbook/|Imaging Cookbook]] is released | +
-| 26-Jan-2012 | Version 10.2 of the [[http://www.astron.nl/radio-observatory/lofar/lofar-imaging-cookbook/|Imaging Cookbook]] is released | +
-| 14-Dec-2011 | Version 10.1 of the [[http://www.astron.nl/radio-observatory/lofar/lofar-imaging-cookbook/|Imaging Cookbook]] is released | +
-| 13-Dec-2011 | New NDPPP msin parameters to combine subbands or to select baselines. \\ By default the aoflagger step writes statistical flag information into QUALITY subtables. | +
-| 4-Nov-2011 | Version 10.0 of the [[http://www.astron.nl/radio-observatory/lofar/lofar-imaging-cookbook/|Imaging Cookbook]] is released | +
-| 7-Sep-2011 | Specification of spectral index in BBS and [[public:user_software:documentation:makesourcedb | makesourcedb]] has changed after addition of support for rotation measure. | +
-| 26-Jul-2011 | [[software:bbstest | BBS end-to-end tests]] runs a series of BBS end-to-end test cases  | +
-| 10-Jul-2011 | Version 9.0 of the [[http://www.astron.nl/radio-observatory/lofar/lofar-imaging-cookbook/|Imaging Cookbook]] is released | +
-| 26-Mar-2011 | Info needed for the BBS beam calculation must be part of the MeasurementSet.  It can be added to old MSs using [[engineering:software:tools:makebeamtables | makebeamtables]]. | +
-| 1-Mar-2011 | Version 6.0 of the [[http://www.astron.nl/radio-observatory/lofar/lofar-imaging-cookbook/|Imaging Cookbook]] is released | +
-| 31-Jan-2011 | Added PhaseShift step to NDPPP | +
-| 28-Jan-2011 | [[public:user_software:documentation:gsm.py | gsm.py]] extracts sources from the Global Sky Model in ''makesourcedb'' format | +
-|  [[previous news ]]  ||+
  
 === User Documentation === === User Documentation ===
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 === MSSS processing === === MSSS processing ===
-The processing of the MSSS observations will be done in an automated way by means of a few [[engineering:software:tools:MSSS-pipelines | pipelines]] that will be started automatically using the scheduler and SAS/MAC.+The processing of the MSSS observations will be done in an automated way by means of a few [[engineering:software:tools:msss-pipelines| pipelines]] that will be started automatically using the scheduler and SAS/MAC.
  
-[[pipeline_changelist|Pipeline Framework Changelist]]+[[software:pipeline_changelist|Pipeline Framework Changelist]]
  
 === RTCP processing === === RTCP processing ===
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 === Useful Tools === === Useful Tools ===
-  * [[engineering:software:tools:useful | Some handy tools and commands]] +  * [[engineering:software:tools:useful| Some handy tools and commands]] 
-  * [[engineering:software:tools:msselect | msselect]]: select baselines in a MeasurementSet +  * [[engineering:software:tools:msselect| msselect]]: select baselines in a MeasurementSet 
-  * [[engineering:software:tools:cexecms | cexecms]]: run a script on cluster nodes for all data files matching a file name pattern +  * [[cexecms| cexecms]]: run a script on cluster nodes for all data files matching a file name pattern 
-  * [[engineering:software:tools:pipeline | Some scripts for running the pipeline]]+  * [[engineering:software:tools:pipeline| Some scripts for running the pipeline]]
   * [[engineering:software:tools| A collection of useful tools and scripts that can be found in /opt/tools ]]   * [[engineering:software:tools| A collection of useful tools and scripts that can be found in /opt/tools ]]
   * [[http://usg.lofar.org/documentation/pipeline/ | Pipeline framework documentation]]   * [[http://usg.lofar.org/documentation/pipeline/ | Pipeline framework documentation]]
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   * {{ lofar_dppp_flags.pdf | Pre-flag document}} - V.N. Pandey   * {{ lofar_dppp_flags.pdf | Pre-flag document}} - V.N. Pandey
   * {{ NDPPP_report.pdf | Testing of DPPP}} - David Rafferty, 11-Mar-2010   * {{ NDPPP_report.pdf | Testing of DPPP}} - David Rafferty, 11-Mar-2010
-  * [[public:user_software:ndppp | DPPP documentation]] +  * [[ndppp| DPPP documentation]] 
-  * [[engineering:software:tools:pythondppp | How to write a DPPP step in Python]]+  * [[engineering:software:tools:pythondppp| How to write a DPPP step in Python]]
   * [[http://usg.lofar.org/wiki/doku.php?id=workshops:2009-02_processing_school:exercise_05 | LOFAR Data Processing School DPPP Exercise]]   * [[http://usg.lofar.org/wiki/doku.php?id=workshops:2009-02_processing_school:exercise_05 | LOFAR Data Processing School DPPP Exercise]]
      
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 === BBS === === BBS ===
-  * [[public:user_software:documentation:bbs | BBS documentation]]+  * [[bbs| BBS documentation]]
   * {{performance_JvZ.pdf | Initial BBS performance}} 07Jan08 - Joris van Zwieten   * {{performance_JvZ.pdf | Initial BBS performance}} 07Jan08 - Joris van Zwieten
   * {{parmdb.pdf | parmdb: Parameter Database}} - Ger van Diepen   * {{parmdb.pdf | parmdb: Parameter Database}} - Ger van Diepen
-  * [[public:user_software:documentation:parmdbm | parmdbm]]: program to maintain a parameter table +  * [[parmdbm| parmdbm]]: program to maintain a parameter table 
-  * [[public:user_software:documentation:parm-export | cross-calibration]]: ways to export (transfer) solutions +  * [[parm-export| cross-calibration]]: ways to export (transfer) solutions 
-  * [[public:user_software:documentation:makesourcedb | makesourcedb, mergesourcedb, showsourcedb]]: programs to create/handle a Source Parameter Database+  * [[makesourcedb| makesourcedb, mergesourcedb, showsourcedb]]: programs to create/handle a Source Parameter Database
   * {{makems.pdf | makems: Creating (distributed) MeasurementSet}} - Ger van Diepen   * {{makems.pdf | makems: Creating (distributed) MeasurementSet}} - Ger van Diepen
-  * [[engineering:software:tools:makebeamtables | makebeamtables]]: add beam info to a MeasurementSet. Needed for BBS after makems.+  * [[makebeamtables| makebeamtables]]: add beam info to a MeasurementSet. Needed for BBS after makems.
  
 === Imaging === === Imaging ===
-  * [[engineering:software:tools:mwimager | mwimager documentation]] +  * [[engineering:software:tools:mwimager| mwimager documentation]] 
-  * [[engineering:software:tools:cimagerdoc | cimager documentation]]+  * [[engineering:software:tools:cimagerdoc| cimager documentation]]
   * {{ mwimager.pdf | description of mwimager, clusterdesc and VDS files }} - Ger van Diepen.   * {{ mwimager.pdf | description of mwimager, clusterdesc and VDS files }} - Ger van Diepen.
   * {{ Cornwell_wprojection.pdf | W - Projection paper}} - Cornwell et al.   * {{ Cornwell_wprojection.pdf | W - Projection paper}} - Cornwell et al.
   * {{ FreqResLOFARimaging_v1.0.pdf | Specification of the Frequency Resolution}} - Ger de Bruyn   * {{ FreqResLOFARimaging_v1.0.pdf | Specification of the Frequency Resolution}} - Ger de Bruyn
-  * [[engineering:software:tools:cimager | Commissioning of the Imager - Last update Aug. 2008]] - Casey Law +  * [[engineering:software:tools:cimager| Commissioning of the Imager - Last update Aug. 2008]] - Casey Law 
-  * [[engineering:software:tools:cimager:batejat | Commissioning of the Imager - Last update Oct. 2009]] - Evert Rol, Fabien Batejat+  * [[engineering:software:tools:cimager:batejat| Commissioning of the Imager - Last update Oct. 2009]] - Evert Rol, Fabien Batejat
   * [[http://staff.science.uva.nl/~evert/lofar/imager | LOFAR Imager test documentation]] - Evert Rol   * [[http://staff.science.uva.nl/~evert/lofar/imager | LOFAR Imager test documentation]] - Evert Rol
  
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 === Global Sky Model === === Global Sky Model ===
-  * [[public:user_software:documentation:gsm.py | gsm.py: extract input for makesourcedb from GSM]]+  * [[gsm.py| gsm.py: extract input for makesourcedb from GSM]]
   * {{tkp_expected_data_rates_volumes.pdf | Expected Data Rates and Volumes for the TKP}} - Bart Scheers   * {{tkp_expected_data_rates_volumes.pdf | Expected Data Rates and Volumes for the TKP}} - Bart Scheers
   * {{tkp_transient_variability_detection.pdf | Transient and Variability Detection Algorithms}} - Bart Scheers   * {{tkp_transient_variability_detection.pdf | Transient and Variability Detection Algorithms}} - Bart Scheers
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 === ParSet documentation === === ParSet documentation ===
   * {{parameterset_3.pdf | LOFAR ParameterSet}} - Ger van Diepen   * {{parameterset_3.pdf | LOFAR ParameterSet}} - Ger van Diepen
-  * NDPPP: [[public:user_software:ndppp#description_of_all_parameters| NDPPP parameter set documentation]] +  * NDPPP: [[ndppp#description_of_all_parameters| NDPPP parameter set documentation]] 
-  * BBS: [[public:user_software:documentation:bbsconfigurationsyntax | BBS parameter set documentation]] +  * BBS: [[bbsconfigurationsyntax| BBS parameter set documentation]] 
-  * mwimager: [[engineering:software:tools:mwimagerparset | mwimager parameter set documentation]]+  * mwimager: [[engineering:software:tools:mwimagerparset| mwimager parameter set documentation]]
  
 === Other documents === === Other documents ===
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 ==== Pipeline Profiling ==== ==== Pipeline Profiling ====
 ---- ----
-Some [[ software:standard_imaging_pipeline:profiling | records of pipeline runs ]] are available for use in profiling. +Some [[software:standard_imaging_pipeline:profiling| records of pipeline runs ]] are available for use in profiling.
- +
-==== People ==== +
-  * [[User:George Heald|George Heald]] (group leader, commissioning) +
-  * [[User:Ger van Diepen|Ger van Diepen]] (NDPPP, parmdb) +
-  * [[User:Tammo Jan Dijkema|Tammo Jan Dijkema]] (Imaging, BBS) +
-  * [[User:Wouter Klijn|Wouter Klijn]] (pipelines) +
-  * [[User:Bas vd Tol|Bas vd Tol]] (imaging, ionosphere, clock errors) +
-  * [[User:Nicolas Vilchez|Nicolas Vilchez]] (pipelines, commissioning) +
  • Last modified: 2016-12-15 07:57
  • by Arno Schoenmakers