public:user_software:losot

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public:user_software:losot [2015-03-11 10:02] – Sarrvesh Sridharpublic:user_software:losot [2017-03-08 15:27] (current) – external edit 127.0.0.1
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 ====== Installing Losoto in a Virtual environment  ====== ====== Installing Losoto in a Virtual environment  ======
-  * Unordered List ItemTested/installed on flits+  * Tested/installed on flits
 <code> <code>
 +# First create a virtual environment
 virtualenv losoto virtualenv losoto
 +# Enter the environment with the following command
 source losoto/bin/activate source losoto/bin/activate
 pip install numpy pip install numpy
Line 8: Line 10:
 pip install cython pip install cython
 Download HDF5 and untar it Download HDF5 and untar it
-./configure --prefix=/home/sarrvesh/bin/hdf5; make; make install +./configure --prefix=/home/user/bin/hdf5; make; make install 
-export LD_LIBRARY_PATH="/home/sarrvesh/bin/hdf5/lib" and HDF5_DIR="/home/sarrvesh/bin/hdf5"+export LD_LIBRARY_PATH="/home/user/bin/hdf5/lib" and HDF5_DIR="/home/user/bin/hdf5"
 pip install tables pip install tables
 pip install progressbar pip install progressbar
 pip install matplotlib pip install matplotlib
 </code> </code>
-  * Unordered List ItemNext download ATLAS and lapack. You can get ATLAS from [[http://sourceforge.net/projects/math-atlas/]] and lapack from [[http://www.netlib.org/lapack/#_software]]. Untar ATLAS+  * Next download ATLAS and lapack. You can get ATLAS from [[http://sourceforge.net/projects/math-atlas/]] and lapack from [[http://www.netlib.org/lapack/#_software]]. Untar ATLAS
 <code> <code>
 mkdir -p ATLAS/BUILD; cd ATLAS/BUILD mkdir -p ATLAS/BUILD; cd ATLAS/BUILD
-../configure -b 64 -Fa alg -fPIC --with-netlib-lapack-tarfile=/home/sarrvesh/lapack-3.5.0.tgz --prefix=/home/sarrvesh/bin/ATLAS/+../configure -b 64 -Fa alg -fPIC --with-netlib-lapack-tarfile=/home/user/lapack-3.5.0.tgz --prefix=/home/user/bin/ATLAS/
 make; cd lib; make shared; make ptshared; cd ..; make install make; cd lib; make shared; make ptshared; cd ..; make install
 export ATLAS = <prefix dir> export ATLAS = <prefix dir>
 pip install scipy pip install scipy
 Download wcs and untar Download wcs and untar
-./configure --prefix=/home/sarrvesh/bin/wcs/; make; make install +./configure --prefix=/home/user/bin/wcs/; make; make install 
-./batchbuild.py --prefix=/home/sarrvesh/bin/pyrap/ --lapack-root=/home/sarrvesh/bin/ATLAS/ --lapack-lib=/home/sarrvesh/bin/ATLAS/lib --wcs-root=/home/sarrvesh/bin/wcs+./batchbuild.py --prefix=/home/user/bin/pyrap/ --lapack-root=/home/user/bin/ATLAS/ --lapack-lib=/home/user/bin/ATLAS/lib --wcs-root=/home/user/bin/wcs 
 +</code> 
 +  * Finally, download losoto from [[https://github.com/revoltek/losoto]] 
 +  * You need to enter the virtual environment before running losoto. So run 
 +<code> 
 +source losoto/bin/activate
 </code> </code>
  • Last modified: 2015-03-11 10:02
  • by Sarrvesh Sridhar