dragnet:benchmarks_of_the_lotaas_pipelines

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Time taken by the individual pipeline components per beam (24-core node)
fits2fil: 6min
rfifind: 15min
mpiprepsubband (253 trials): 3min
single pulse search: 1min
realfft: 10sec
rednoise: 10sec
accelsearch (-zmax=0 ; –numharm=16): 1min20sec
accelsearch (-zmax=50 ; –numharm=16): 12min
accelsearch (-zmax=50 ; –numharm=8): 5min
accelsearch (-zmax=50 ; –numharm=8): 26min
plots: 20sec
python sifting and folding: 21min
pfd scrunching: 5sec
data copying: a few secs
candidate scoring: a few secs

Total time spent for the first large set of DM trials (0-4000)
mpiprepsubband: 40min
sp: 16min
realfft: 3.5min
rednoise: 3.5min
accelsearch (zmax=0;numharm=16): 21min
accelsearch (zmax=0;numharm=16): 192min

Total time spent for the second large set of DM trials (4000-10000)
mpiprepsubband: 24min
sp: 8min
realfft: 2min
rednoise: 2min
accelsearch (zmax=0;numharm=16): 11min
accelsearch (zmax=0;numharm=16): 96min

% time alloc. zmax=0;numharm=16 zmax=50;numharm=16 zmax=50;numharm=8 zmax=200;numharm=8
fil conversion 3 1
rfifind 9 3
dedispersion 37 16
sp search 14 5
realfft 3 1
rednoise 3 1
accelsearch 18 67
folding 12 5
data copying/etc 1 1

Total processing time per beam (zmax=0;numharm=16): ~3hours
Total processing time per beam (zmax=50;numharm=16): ~7hours

mpiprepsubband (253 trials): 38sec

32-bit to 8-bit downsampling on CEP2 (per observation): 6-8 hours Transferring from CEP2 to LTA (per observation): 2-3 hours Observation downloading on cartesius (1-core): ~8hours

  • Last modified: 2015-08-20 23:50
  • by Sotiris Sanidas